TSS-seq2 – an improved method for the highly specific detection of transcription start sites
Understanding gene transcription—the process by which genetic information encoded in DNA is converted into RNA—is…
Browsing: Publications
rMATS-turbo – an efficient and flexible computational tool for alternative splicing analysis of large-scale RNA-seq data
The process of alternative splicing adds a layer of complexity to the way genetic information…
CANAL – continually adapting pre-trained language model to universal annotation of single-cell RNA-seq data
Annotating cell types within single-cell RNA sequencing (scRNA-seq) datasets has posed a significant challenge, especially…
Correcting 4sU induced quantification bias in nucleotide conversion RNA-seq data
In the realm of molecular biology, understanding the intricate processes of RNA synthesis and turnover…
scEM – a new ensemble framework for predicting cell type composition based on scRNA-seq data
In recent years, single-cell RNA sequencing (scRNA-seq) technology has revolutionized our understanding of cellular composition…
cnnImpute – missing value recovery for single cell RNA sequencing data
In the world of biology, understanding the intricacies of diseases and cellular diversity has always…
STACAS – semi-supervised integration of single-cell transcriptomics data
Single-cell RNA sequencing (scRNA-seq) has revolutionized our understanding of cellular diversity and function. However, the…
Researchers develop new approaches to live-track the production of different types of blood cells in mice
Scientists have found a way to monitor in real time how bone marrow stem cells…
TFvelo – gene regulation inspired RNA velocity estimation
Understanding the dynamics of gene expression within single cells is crucial for deciphering cell fate…
dRNA HybISS – high resolution spatial profiling of kidney injury and repair using RNA hybridization-based in situ sequencing
Understanding the intricate workings of the kidney and how it responds to injury is crucial…