scAN1.0 – a reproducible and standardized pipeline for processing 10X single cell RNAseq data
Single cell transcriptomics has recently seen a surge in popularity, leading to the need for…
Browsing: Publications
The hidden power of intracellular neighborhoods
Back in 2018, the lab of Christine Mayr, MD, PhD, at Memorial Sloan Kettering Cancer Center…
JOINTLY – interpretable joint clustering of single-cell transcriptomes
Single-cell and single-nucleus RNA-sequencing (sxRNA-seq) is increasingly being used to characterise the transcriptomic state of…
Scaling up single-cell RNA-seq data analysis with CellBridge workflow
Single-cell RNA sequencing (scRNA-seq) has revolutionized the study of gene expression at the individual cell…
NIH researchers create single-cell RNA-seq atlas detailing early stages of zebrafish development
Zebrafish are a powerful model for studying embryonic progression in vertebrates. BEST4+ cells are labelled…
MarrowCellDLD – a microfluidic method for label-free retrieval of fragile bone marrow-derived cells
Functional bone marrow studies have focused primarily on hematopoietic progenitors, leaving limited knowledge about other…
scPML – pathway-based multi-view learning for cell type annotation from single-cell RNA-seq data
Recent developments in single-cell technology have enabled the exploration of cellular heterogeneity at an unprecedented…
Researchers use single-cell RNA sequencing to explore the effects of vascularization strategies on brain organoids
Researchers at Waseda University led by Assistant Professor Kosuke Kataoka, have uncovered crucial insights into brain…
Ambiguous genes due to aligners and their impact on RNA-seq data analysis
The main scope of the study is ambiguous genes, i.e. genes whose expression is difficult…
For metastatic prostate cancer, immunotherapy may have unexpected potential
Immunotherapy has been disappointing as a prostate cancer treatment, but a new Columbia study suggests…