Sparse group lasso outperforms other penalized regression methods for gene (feature) selection from scRNA-seq data
With the emergence of single-cell RNA sequencing (scRNA-seq) technology, scientists are able to examine gene…
Browsing: Publications
SARS-CoV-2 RNA is readily detectable at least 8 months after shedding in an isolation facility
Environmental monitoring of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) for research and public health…
Genetic sequencing could contain future COVID-19 variants
A new study from the University of Georgia suggests genetic sequencing could help prevent the…
Light-Seq – turning the spotlight on cells in tissues so RNA can tell their story
Full-transcriptome sequencing of hard-to-access cells in intact tissues facilitates deeper understanding of disease and biology…
PPMS – A framework to Profile Primary MicroRNAs from Single-cell RNA-sequencing datasets
Single-cell/nuclei RNA-sequencing (scRNA-seq) technologies can simultaneously quantify gene expression in thousands of cells across the…
CoRMAP – comparative transcriptomics analysis pipeline for the meta-analysis of phylogenetically divergent datasets
Transcriptional regulation is a fundamental mechanism underlying biological functions. In recent years, a broad array…
New programmable RNA-based tool can monitor and manipulate cells
Tagging and illuminating only the inhibitory “brake” cells (green) in human brain tissue is just…
SoloTE – improved analysis of transposable elements in single-cell RNA-Seq data using locus-specific expression
Transposable Elements (TEs) contribute to the repetitive fraction in almost every eukaryotic genome known to…
RNA sequencing identifies flu-fighting pathways and genes essential for influenza A immune defense
Findings could inform novel treatments for the flu in humans Researchers have identified the gene TDRD7 as a key…
Remarkable improvement in detection of readthrough downstream-of-gene transcripts by semi-extractable RNA-sequencing
The mammalian cell nucleus contains dozens of membrane-less nuclear bodies that play significant roles in…