SAMStat 2 – quality control for next generation sequencing data
SAMStat is an efficient program to extract quality control metrics from fastq and SAM/BAM files.…
Browsing: Publications
Researchers demonstrate value of genomic sequencing and artificial intelligence to improve cancer diagnosis
Investigators from Hackensack Meridian John Theurer Cancer Center (JTCC), part of the NCI-designated Lombardi Comprehensive…
Expanded RNA molecules can gum up our brain cells
Our DNA contains four types of molecules, adenine, cytosine, thymine, and guanine—called nucleotides or bases—running…
MARVEL – an integrated alternative splicing analysis platform for single-cell RNA sequencing data
Alternative splicing is an important source of heterogeneity underlying gene expression between individual cells but…
Technology developed at HIRI records ribonucleic acids in individual living cells
Do we simply ingest a diagnostic probiotic based on programmed ribonucleic acids to analyze the…
Single-cell RNA-sequencing uncovers new cell types involved in osteoarthritis
And the development of a new slow-release drug seeks to target them A Michigan Medicine…
INTERSTELLAR – A universal sequencing read interpreter
Massively parallel DNA sequencing has led to the rapid growth of highly multiplexed experiments in…
FIIND-Seq – a tool to investigate rare, previously inaccessible cells that play a key role in multiple sclerosis
Rare cell types can have an undue influence on human health. Previous research has suggested…
scONE-seq – A single-cell multi-omics method enables simultaneous dissection of phenotype and genotype heterogeneity from frozen tumors
Single-cell multi-omics can provide a unique perspective on tumor cellular heterogeneity. Most previous single-cell whole-genome…
SPOTS – Integration of whole transcriptome spatial profiling with protein markers
Spatial transcriptomics and proteomics provide complementary information that independently transformed our understanding of complex biological…