NORMSEQ – a tool for evaluation, selection and visualization of RNA-Seq normalization methods
RNA-sequencing has become one of the most used high-throughput approaches to gain knowledge about the…
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Interactive analysis of single-cell data using flexible workflows with the Single-Cell Toolkit 2
Analysis of single-cell RNA sequencing (scRNA-seq) data can reveal novel insights into the heterogeneity of…
RNAseqChef – a web-based integrative transcriptome analysis to automatically detect, integrate, and visualize differentially expressed genes and their biological functions
RNA sequencing (RNA-seq) is a powerful technique for understanding cellular state and dynamics. However, comprehensive…
ExpressAnalyst – a unified platform for RNA-sequencing analysis in non-model species
The increasing application of RNA sequencing to study non-model species demands easy-to-use and efficient bioinformatics…
WASP – a versatile, web-accessible single cell RNA-Seq processing platform
The technology of single cell RNA sequencing (scRNA-seq) has gained massively in popularity as it…
Biological misinterpretation of transcriptional signatures can undermine faithful alignment between clinical samples and preclinical data/models
Precise mechanism-based gene expression signatures (GES) have been developed in appropriate in vitro and in…
aTAP – automated transcriptome analysis platform for processing RNA-seq data by de novo assembly
RNA-seq is a sequencing technique that uses next-generation sequencing (NGS) to explore and study the…
PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics
Single-cell RNA-seq (scRNA-seq) is a powerful genomics technology to interrogate the cellular composition and behaviors…
ConfoundR – stop biological misinterpretation of transcriptional signatures
Precise mechanism-based gene expression signatures (GESs) have been developed in appropriate in vitro and in…
Researchers develop online portal to show how biases in RNA sequences affect gene expression
A recent publication from researchers at the University of Kentucky explains the importance of identifying…