betAS – intuitive analysis and visualisation of differential alternative splicing using beta distributions
Next generation RNA sequencing allows alternative splicing (AS) quantification with unprecedented resolution, with the relative…
Browsing: Web Tools
RiboGalaxy – A Galaxy-based web platform for ribosome profiling data processing – 2023 Update
Ribosome profiling (Ribo-Seq) captures a “snapshot” of ribosomes’ locations at the entire transcriptome of a…
Establishment of a hybridoma sequencing pipeline for sequencing of antibody variable regions
The Neuroscience Monoclonal Antibody Sequencing Initiative (NeuroMabSeq) is a concerted effort to determine and make…
NORMSEQ – a tool for evaluation, selection and visualization of RNA-Seq normalization methods
RNA-sequencing has become one of the most used high-throughput approaches to gain knowledge about the…
Interactive analysis of single-cell data using flexible workflows with the Single-Cell Toolkit 2
Analysis of single-cell RNA sequencing (scRNA-seq) data can reveal novel insights into the heterogeneity of…
RNAseqChef – a web-based integrative transcriptome analysis to automatically detect, integrate, and visualize differentially expressed genes and their biological functions
RNA sequencing (RNA-seq) is a powerful technique for understanding cellular state and dynamics. However, comprehensive…
ExpressAnalyst – a unified platform for RNA-sequencing analysis in non-model species
The increasing application of RNA sequencing to study non-model species demands easy-to-use and efficient bioinformatics…
WASP – a versatile, web-accessible single cell RNA-Seq processing platform
The technology of single cell RNA sequencing (scRNA-seq) has gained massively in popularity as it…
Biological misinterpretation of transcriptional signatures can undermine faithful alignment between clinical samples and preclinical data/models
Precise mechanism-based gene expression signatures (GES) have been developed in appropriate in vitro and in…
aTAP – automated transcriptome analysis platform for processing RNA-seq data by de novo assembly
RNA-seq is a sequencing technique that uses next-generation sequencing (NGS) to explore and study the…