WASP – a versatile, web-accessible single cell RNA-Seq processing platform
The technology of single cell RNA sequencing (scRNA-seq) has gained massively in popularity as it…
Browsing: Web Tools
Biological misinterpretation of transcriptional signatures can undermine faithful alignment between clinical samples and preclinical data/models
Precise mechanism-based gene expression signatures (GES) have been developed in appropriate in vitro and in…
aTAP – automated transcriptome analysis platform for processing RNA-seq data by de novo assembly
RNA-seq is a sequencing technique that uses next-generation sequencing (NGS) to explore and study the…
PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics
Single-cell RNA-seq (scRNA-seq) is a powerful genomics technology to interrogate the cellular composition and behaviors…
ConfoundR – stop biological misinterpretation of transcriptional signatures
Precise mechanism-based gene expression signatures (GESs) have been developed in appropriate in vitro and in…
Researchers develop online portal to show how biases in RNA sequences affect gene expression
A recent publication from researchers at the University of Kentucky explains the importance of identifying…
CF-Seq – rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies
Researchers studying cystic fibrosis (CF) pathogens have produced numerous RNA-seq datasets which are available in…
GEOexplorer – a webserver for gene expression analysis and visualisation
Gene Expression Omnibus (GEO) is a database repository hosting a substantial proportion of publicly available…
ICARUS – an interactive web server for single cell RNA-seq analysis
Researchers from the University of Auckland have developed ICARUS, a web server to enable users…