CORESH – a gene signature-based search engine for public gene expression datasets
Public databases like the Gene Expression Omnibus (GEO) hold enormous amounts of gene expression data…
Browsing: Web Tools
Genomic Testing Cooperative unveils “GTC Interpret,” a groundbreaking web-based platform for partner labs to access analyzed sequencing data and finalize reports
Genomic Testing Cooperative (GTC), a leader in advanced genomic testing, announced the launch of GTC Interpret,…
REDalign – accurate RNA structural alignment using residual encoder-decoder network
RNA molecules are essential for various biological processes, and studying them helps scientists understand how…
WebAtlas pipeline for integrated single-cell and spatial transcriptomic data
Single cell RNA-sequencing (scRNA-seq) and spatial transcriptomics (ST) are powerful techniques that offer complementary insights…
sCIRCLE – an interactive visual exploration tool for single cell RNA-Seq data
A research team from HIRI and THWS develops a tool for visualizing single-cell data Modern…
Benchmarking second-generation methods for cell-type deconvolution of transcriptomic data
In silico cell-type deconvolution from bulk transcriptomics data is a powerful technique to gain insights…
Introducing Alzheimer DataLENS: a powerful tool for Alzheimer’s Disease research
Alzheimer’s disease (AD) is a complex and devastating condition that affects millions of people worldwide.…
betAS – intuitive analysis and visualisation of differential alternative splicing using beta distributions
Next generation RNA sequencing allows alternative splicing (AS) quantification with unprecedented resolution, with the relative…
RiboGalaxy – A Galaxy-based web platform for ribosome profiling data processing – 2023 Update
Ribosome profiling (Ribo-Seq) captures a “snapshot” of ribosomes’ locations at the entire transcriptome of a…
Establishment of a hybridoma sequencing pipeline for sequencing of antibody variable regions
The Neuroscience Monoclonal Antibody Sequencing Initiative (NeuroMabSeq) is a concerted effort to determine and make…