STRIDE – a topic-model-based method to deconvolve spatial transcriptomics using scRNA-seq
The recent advances in spatial transcriptomics have brought unprecedented opportunities to understand the cellular heterogeneity…
Browsing: Spatial Analysis
Spacemake – processing and analysis of large-scale spatial transcriptomics data
Spatial sequencing methods increasingly gain popularity within RNA biology studies. State-of-the-art techniques quantify messenger RNA…
SPIRAL – Significant Process InfeRence ALgorithm for single cell RNA-sequencing and spatial transcriptomics
Gene expression data is complex and may hold information regarding multiple biological processes at once.…