NORMSEQ – a tool for evaluation, selection and visualization of RNA-Seq normalization methods
RNA-sequencing has become one of the most used high-throughput approaches to gain knowledge about the…
Browsing: Publications
nanoSPLITS – parallel measurement of transcriptomes and proteomes from same single cells
Single-cell multiomics can provide comprehensive insights into gene regulatory networks, cellular diversity, and temporal dynamics.…
A versatile nuclei extraction protocol for single nucleus sequencing in non-model species
The use of single cell sequencing technologies has exploded over recent years, and is now…
MicroRNAs in immune cells help protect against metabolic defects in obesity
Vanderbilt researchers have demonstrated that a cluster of microRNAs — small pieces of RNA that…
ScRNAPip – A systematic and dynamic pipeline for single-cell RNA sequencing analysis
With the advancement of sequencing technology, cell separation, and whole-genome amplification techniques, single cell technology…
COMPLETE-seq – noncoding RNA liquid biopsy platform improves cancer detection
A novel liquid biopsy technology developed by Assistant Professor of Biomolecular Engineering Daniel Kim’s lab…
Two distinct molecular faces of preeclampsia revealed by single-cell transcriptomics
Amit Zeisel, PhD and Ido Solt, MD and their research team at the Technion –…
sNucConv – a bulk RNA-seq deconvolution method trained on single-nucleus RNA-seq data to estimate cell-type composition
Deconvolution algorithms rely on single-cell RNA-sequencing (scRNA-seq) data applied onto bulk RNA-sequencing (bulk RNA-seq) to…
TimeTalk – decipher cell-cell communication from single-cell RNA-seq datasets
Early embryonic development is a dynamic process that relies on proper cell-cell communication to form…
Single-nucleus RNA sequencing identifies neuronal diversity and candidate mediators of circuit assembly
The superior colliculus (SC) is a sensorimotor structure in the midbrain that integrates input from…