EMBER – enhancing breast cancer diagnosis and treatment
Addressing problems with diagnosing and treating breast cancer, scientists at EPFL have developed EMBER, a…
Browsing: Publications
Unlocking the power of nanopores
Transmembrane β-barrel pores (TMBs) are extensively used for single-molecule DNA and RNA sequencing. They enable…
DEHOGT – differentially expressed heterogeneous overdispersion genes testing for count data
RNA sequencing (RNA-seq) is a powerful tool in biology that helps researchers understand how genes…
STGAT – integrating spatial transcriptomics and bulk RNA-seq to predict gene expression with enhanced resolution
In cancer research, understanding how genes are expressed spatially within tumor tissues is crucial for…
Nanopore sequencing and machine learning help researchers better understand the role of RNA methylation in cancer
RNA modification could serve as a therapeutic target for certain types of cancer, according to…
SwitchFinder – a systematic search for RNA structural switches across the human transcriptome
RNA structural switches play crucial roles in regulating gene expression, particularly in bacteria, but their…
RNA-seq validation – software for selection of reference and variable candidate genes for RT-qPCR
Introduction to RT-qPCR Real-time quantitative PCR (RT-qPCR) is a powerful tool used by scientists to…
Exploring functional conservation in silico: a new machine learning approach to RNA-editing
About 50 years ago, the field of molecular biology began to uncover the mechanisms behind…
Exploring the impact of primer length on efficient gene detection via RNA sequencing
Reverse transcription (RT) is a fundamental process in RNA analysis, converting RNA into complementary DNA…
SEARCHLIGHT – single-cell RNA-sequencing enabled acquisition of mRNA and consensus haplotypes linking individual genotypes and host transcriptomes
Understanding how viral populations evolve and adapt is crucial. Just like animals or plants, viruses…