Whole blood RNA sequencing of severe COVID-19 cases
Researchers from Osaka University evaluate RNA profiles in the blood to shed light on the…
Browsing: Publications
In silico validation of RNA-Seq results can identify gene fusions with oncogenic potential
RNA-Sequencing (RNA-Seq) can identify gene fusions in tumors, but not all these fusions have functional…
scraps – an end-to-end pipeline for measuring alternative polyadenylation at high resolution using single-cell RNA-seq
Alternative cleavage and polyadenylation (APA) contributes to the diversity of mRNA 3′ ends, affecting post-transcriptional…
Single-cell RNA sequencing uncovers a major role of nuclear noncoding RNA networks in systemic antiviral responses to SARS-CoV-2
The systemic immune response to viral infection is shaped by master transcription factors, such as…
Total RNA-Seq a favorable alternative to metagenomics for taxonomic ID of microbial communities
Metagenomics and total RNA sequencing (total RNA-Seq) have the potential to improve the taxonomic identification…
A potent new tool combining mass spectrometry data with long-read RNA sequencing to advance medical research
University of Virginia School of Medicine researchers and their collaborators have created a powerful new…
aTAP – automated transcriptome analysis platform for processing RNA-seq data by de novo assembly
RNA-seq is a sequencing technique that uses next-generation sequencing (NGS) to explore and study the…
smStructure-seq reveals how environmental changes affect the shapes of RNA in living cells
The impact of environmental conditions on the dynamic structures of RNAs in living cells has…
Spatial-ATAC-seq – spatially resolved chromatin accessibility profiling of tissue sections
Cellular function in tissue is dependent on the local environment, requiring new methods for spatial…
scRNA-Seq analysis reveals that the cells regulating blood stem cell maintenance are more diverse than expected
Deep molecular analysis of the bone marrow microenvironment reveals that the cells regulating blood stem…