SPoTLIghT – integrating histopathology and transcriptomics for spatial tumor microenvironment profiling
Cancer research is increasingly focused on understanding the tumor microenvironment (TME) — the community of…
Browsing: Publications
Single-cell RNA-seq reveals the transcriptional program underlying tumor progression and metastasis in neuroblastoma
Neuroblastoma (NB), the most prevalent extracranial solid tumor in children, poses a significant therapeutic challenge…
MST-m6A – a novel multi-scale transformer-based framework for prediction of m6A modification sites
In recent years, scientists have found that cells use small chemical “tags” on RNA molecules…
RNA Sequencing reveals shared gene expression patterns between Alzheimer’s disease and alcohol use disorder
By examining RNA in hundreds of thousands of individual brain cells, Scripps Research scientists further…
Leveraging a comprehensive unbiased RNAseq database to characterize human monocyte-derived macrophage gene expression profiles
Macrophages are crucial players in our immune system, known for their ability to adapt to…
RNA Institute study explores cellular response to Zika Virus infection
Developing new drugs to treat and prevent viral infections requires a precise understanding of how…
Leveraging deep single-soma RNA sequencing to explore the neural basis of human somatosensation
Our ability to feel sensations like touch, pain, and temperature relies on a group of…
Seq-Scope – repurposing Illumina sequencing flow cells for high-resolution spatial transcriptomics
Spatial transcriptomics (ST) is reshaping how scientists study gene expression in tissues. Traditional methods like…
Understanding aging through the lens of single-cell RNA sequencing
Aging is a natural process that affects all living organisms, but understanding how it occurs…
Novel colon cancer subtype identifier based on RNA splicing
Researchers have discovered an alternative way to classify distinct types of colon cancer, making the…