rnaCrosslinkOO – an object-oriented R package for the analysis of RNA structural data generated by RNA crosslinking experiments
RNA molecules stand as pivotal players, orchestrating a myriad of essential functions such as gene…
Browsing: Publications
The effect of data transformation on low-dimensional integration of single-cell RNA-seq
Recent developments in single-cell RNA sequencing have opened up a multitude of possibilities to study…
A new tool for plant long non-coding RNA identification
Long non-coding RNAs (lncRNAs) are ubiquitous transcripts with crucial regulatory roles in various biological processes,…
RNA-Seq reveals cancer cell–immune cell interactions predict immunotherapy response
UT Southwestern-led study produces new tool for cancer-fighting precision medicine UT Southwestern researchers aiming to better…
Getting dynamic information from static snapshots
UChicago researchers use machine learning insights to provide a better way for cancer and immunology…
SifiNet – a robust and accurate method to identify feature gene sets and annotate cells
Understanding the distinct gene sets and subpopulations within heterogeneous cell populations is essential for unraveling…
Extraction of high quality and high yield RNA from frozen EDTA blood
For medical diagnostics and biomarker discovery, the ability to analyze gene expression from peripheral blood…
RNA-Seq unveila a hidden trait in Mycobacterium genomes governing stress adaptation
New research led by Qingyun Liu, PhD, assistant professor in the UNC Department of Genetics,…
New RNA sequencing technology uncovers mechanism affecting generation of new COVID variants
The SARS-CoV-2 virus that causes COVID has the unsettling ability of often generating variants of…
MapUTR – identifies rare functional 3′ UTR variants regulating mRNA abundance of cancer driver genes
Understanding the function of rare non-coding variants has long been a daunting task. These elusive…