dRNASb – a systems biology approach to decipher dynamics of host-pathogen interactions using temporal dual RNA-seq data
When our body gets infected, a complex battle ensues between our immune system and the…
Browsing: Publications
CUT&Tag and mRNA sequencing in single cells creates a comprehensive map of the epigenetic landscape during human neural development
Understanding how our cells develop and specialize into different types is a complex and fascinating…
EMBER – enhancing breast cancer diagnosis and treatment
Addressing problems with diagnosing and treating breast cancer, scientists at EPFL have developed EMBER, a…
Unlocking the power of nanopores
Transmembrane β-barrel pores (TMBs) are extensively used for single-molecule DNA and RNA sequencing. They enable…
DEHOGT – differentially expressed heterogeneous overdispersion genes testing for count data
RNA sequencing (RNA-seq) is a powerful tool in biology that helps researchers understand how genes…
STGAT – integrating spatial transcriptomics and bulk RNA-seq to predict gene expression with enhanced resolution
In cancer research, understanding how genes are expressed spatially within tumor tissues is crucial for…
Nanopore sequencing and machine learning help researchers better understand the role of RNA methylation in cancer
RNA modification could serve as a therapeutic target for certain types of cancer, according to…
SwitchFinder – a systematic search for RNA structural switches across the human transcriptome
RNA structural switches play crucial roles in regulating gene expression, particularly in bacteria, but their…
RNA-seq validation – software for selection of reference and variable candidate genes for RT-qPCR
Introduction to RT-qPCR Real-time quantitative PCR (RT-qPCR) is a powerful tool used by scientists to…
Exploring functional conservation in silico: a new machine learning approach to RNA-editing
About 50 years ago, the field of molecular biology began to uncover the mechanisms behind…