ELASTomics – high-throughput mechanical phenotyping and transcriptomics of single cells
Understanding how cells work at a fundamental level is crucial for advancing medical and biological…
Browsing: Other Tools
GRouNdGAN – GRN-guided simulation of single-cell RNA-seq data using causal generative adversarial networks
In the world of biology, understanding how genes are regulated and how they interact within…
CASi – a framework for cross-timepoint analysis of single-cell RNA sequencing data
Single-cell RNA sequencing (scRNA-seq) technology has emerged as a powerful tool, allowing scientists to peer…
rnaCrosslinkOO – an object-oriented R package for the analysis of RNA structural data generated by RNA crosslinking experiments
RNA molecules stand as pivotal players, orchestrating a myriad of essential functions such as gene…
The M2 pipeline – a novel tool for rapidly analyzing host metabolic profiles from rna-seq data
The innovative M2 pipeline strengthens the advanced metabolic modeling functionality of NIMML’s TITAN-X precision medicine platform…
DEBFold – computational identification of rna secondary structures for sequences across structural families using deep learning
RNA molecules are emerging as key players in cellular processes, going beyond their traditional role…
MapUTR – identifies rare functional 3′ UTR variants regulating mRNA abundance of cancer driver genes
Understanding the function of rare non-coding variants has long been a daunting task. These elusive…
mAFiA – detecting m6A at single-molecular resolution via direct RNA sequencing and realistic training data
Unraveling the mysteries of RNA has always been a challenging task, but recent advancements in…
Improved RNA stability estimation through Bayesian modeling reveals insights into RNA decay rates
Gene expression, the process by which information encoded in DNA is translated into functional molecules…
BulkECexplorer compiles endothelial bulk transcriptomes to predict functional versus leaky transcription
Understanding the molecular activity of different cell types is essential for unraveling the mysteries of…