New machine learning tool enhances cancer detection in single-cell RNA sequencing
Cancer is a complex disease, and even within a single tumor, not all cells are…
Browsing: Other Tools
LocusMasterTE – integrating long-read RNA sequencing improves locus-specific quantification of transposable element expression
Transposable elements (TEs), often called “jumping genes,” are mobile DNA sequences that can relocate within…
scPAS – single-cell phenotype-associated subpopulation identifier
Recent advancements in single-cell sequencing have allowed scientists to explore the complexity of tissues by…
SurfR – identifying surface protein coding genes from expression data
Cell-surface proteins play a crucial role in how cells communicate with each other and interact…
Unraveling RNA sequencing challenges: a new approach to understanding nascent and mature mRNA
RNA sequencing (RNA-seq) has revolutionized our ability to study gene expression by providing detailed snapshots…
Pantry – multimodal analysis of RNA sequencing data from populations for genomic interpretation
RNA sequencing (RNA-seq) is an invaluable tool for studying how genes are regulated in the…
ELATUS – uncovering functional lncRNAs by scRNA-seq
Long non-coding RNAs, or lncRNAs, are an important part of our genetic code, but they…
scGraphformer – unveiling cellular heterogeneity and interactions in scRNA-seq data using a scalable graph transformer network
Single-cell RNA sequencing (scRNA-seq) has become a cornerstone tool in modern biology, allowing researchers to…
REDalign – accurate RNA structural alignment using residual encoder-decoder network
RNA molecules are essential for various biological processes, and studying them helps scientists understand how…
ZINBStein – shrinkage estimation of gene interaction networks in single-cell RNA sequencing data
Understanding how genes interact with one another is crucial for unraveling the complexities of biological…