Researchers combine RNA-Seq datasets and apply Uniform Manifold Approximation and Projection (UMAP) to create new brain atlas
Sometimes, in the quest for new data, scientists forget that existing datasets can be treasure…
Browsing: Data Sets
Zebrahub – a single-embryo single-cell RNA sequencing atlas of zebrafish development
Elucidating the developmental process of an organism will require the complete cartography of cellular lineages…
BEETLE ATLAS – a definitive, tissue-specific transcriptomic resource based on RNA-Seq data for the Tribolium community
More than half of all extant metazoan species on earth are insects. The evolutionary success…
Single-cell transcriptomic profiling of Crohn’s disease reveals a detailed picture of inflammation in the gut
A close look at how the inflammatory bowel disease affects different organs could provide a…
hECA – A human Ensemble Cell Atlas using data collected from scattered public datasets
Imagine a virtual human body, rich in complexity and detail, that enables scientists to simulate…
A spatially resolved atlas of the human lung characterizes a gland-associated immune niche
Single-cell transcriptomics has allowed unprecedented resolution of cell types/states in the human lung, but their…
Mount Sinai researchers present a comprehensive, single-nucleus RNA sequencing atlas of late prenatal human development
Late prenatal development of the human neocortex encompasses a critical period of cortical expansion and…
Impact of the Human Cell Atlas on medicine
Single-cell atlases promise to provide a ‘missing link’ between genes, diseases and therapies. By identifying…
Systematic characterization of cancer transcriptome at transcript resolution
Transcribed RNAs undergo various regulation and modification to become functional transcripts. Notably, cancer transcriptome has…
High temporal resolution Nanopore sequencing dataset of SARS-CoV-2 and host cell RNAs
Recent studies have disclosed the genome, transcriptome, and epigenetic compositions of severe acute respiratory syndrome…