RNA Sequencing – Your own pipeline from scratch – #1

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Learn how to create a computational RNA sequencing pipeline using free and open source bioinformatics software. During this live stream Danny Arends will teach you how to use VirtualBox to setup a Linux environment within windows. This first stream will be a step by step explanation on how to install all the tools required for RNA-Seq analysis (Trimmomatic, STAR, HTSlib, BCFtools, samtools, GATK, SRAtoolkit).

Code on Github: https://gist.github.com/DannyArends/0…

Presentation on OneDrive: https://1drv.ms/b/s!AtYWSYRMmSHZh4gFs…