Understanding plant-microbe interactions with enhanced dual RNA sequencing
Plant-microbe interactions are complex and dynamic, playing crucial roles in plant health and growth. To…
Browsing: Publications
DeepGSEA – explainable deep gene set enrichment analysis for single-cell transcriptomic data
Gene set enrichment (GSE) analysis is a crucial tool for interpreting gene expression data. It…
Aletsch – accurate assembly of multiple RNA-seq samples
High-throughput RNA sequencing (RNA-seq) has revolutionized our ability to decode the activities of genes within…
scGAAC – A graph attention autoencoder for clustering single-cell RNA-sequencing data
Single-cell RNA sequencing (scRNA-seq) is a groundbreaking technology that allows scientists to study the detailed…
CapTrap-seq – a platform-agnostic and quantitative approach for high-fidelity full-length RNA sequencing
RNA sequencing (RNA-seq) is a powerful technique used to study the transcriptome—the complete set of…
Mount Sinai study reveals significant differences in RNA editing between postmortem and living human brain
Researchers from the Icahn School of Medicine at Mount Sinai have shed valuable light on…
CPA-Perturb-seq – multiplexed single-cell characterization of alternative polyadenylation regulators
Introduction to Polyadenylation Polyadenylation is a critical process that occurs at the end of a…
Coexpression enhances cross-species integration of single-cell RNA sequencing across diverse plant species
Single-cell RNA sequencing (scRNA-seq) is a powerful technique that allows scientists to study gene expression…
Researchers improve measurement of gene expression in single cells
Northwestern Medicine scientists have developed a new technique to identify individual cells for RNA sequencing,…
Splice_sim – a nucleotide conversion-enabled RNA-seq simulation and evaluation framework
RNA plays a crucial role in all living cells, acting as a messenger that carries…