DeepSAP – improved RNA-seq alignment by integrating transcriptome guidance with transformer-based splice junction scoring
RNA sequencing (RNA-seq) has opened up new frontiers in our understanding of gene expression and…
Browsing: gene expression
Single-cell RNA sequencing provides comprehensive map of acute myeloid leukemia cell states
A new gene expression atlas developed using single-cell RNA sequencing data shows how normal hematopoietic…
Detection of viral sequences at single-cell resolution identifies novel viruses associated with host gene expression changes
With the explosion of RNA sequencing in research and medicine, scientists are getting an increasingly…
adverSCarial – assessing the vulnerability of single-cell RNA-sequencing classifiers to adversarial attacks
Single-cell RNA sequencing (scRNA-seq) has become a powerful tool for analyzing gene expression at the…
Deep dive into plant signalling data reveals a noisy “elephant in the room”
A far-reaching study has cast doubt on statistical methods used to identify long distance signalling…
Identification of high-resolution gene expression atlas of woody tissue
Single cell techniques have revolutionized molecular life sciences. Ari Pekka Mähönen’s research group at the…
Transcriptomic profiling of individual bacteria by MATQ-seq
Understanding how individual bacterial cells behave—even when they’re part of the same population—has always been…
RNA sequencing reveals guinea pig embryos as a valuable model for human development
Researchers at Karolinska Institutet have identified the guinea pig as a promising model for studying…
CoupleVAE – coupled variational autoencoders for predicting perturbational single-cell RNA sequencing data
As single-cell RNA sequencing becomes more advanced, scientists are now able to analyze the genetic…
A realistic FastQ-based framework – FastQDesign for scRNA-seq study design issues
Single-cell RNA sequencing (scRNA-seq) has revolutionized the way scientists study gene expression at the individual…