The Curated Cancer Cell Atlas provides a comprehensive characterization of tumors at single-cell resolution
Cancer is not just a single disease, it’s an ever-changing landscape of cells with different…
Browsing: gene expression
Integration of mass cytometry and single-cell RNA-sequencing of cells in bronchoalveolar lavage
Scientists often rely on cutting-edge tools to understand how cells behave, especially when studying complex…
scRDEN – single-cell dynamic gene rank differential expression network and robust trajectory inference
Understanding how a single cell matures and takes on a specific role in the body…
CORESH – a gene signature-based search engine for public gene expression datasets
Public databases like the Gene Expression Omnibus (GEO) hold enormous amounts of gene expression data…
TIRE-seq simplifies transcriptomics via integrated RNA capture and library preparation
RNA sequencing (RNA-seq) has become a go-to method for exploring how genes are expressed across…
DeepSAP – improved RNA-seq alignment by integrating transcriptome guidance with transformer-based splice junction scoring
RNA sequencing (RNA-seq) has opened up new frontiers in our understanding of gene expression and…
Single-cell RNA sequencing provides comprehensive map of acute myeloid leukemia cell states
A new gene expression atlas developed using single-cell RNA sequencing data shows how normal hematopoietic…
Detection of viral sequences at single-cell resolution identifies novel viruses associated with host gene expression changes
With the explosion of RNA sequencing in research and medicine, scientists are getting an increasingly…
adverSCarial – assessing the vulnerability of single-cell RNA-sequencing classifiers to adversarial attacks
Single-cell RNA sequencing (scRNA-seq) has become a powerful tool for analyzing gene expression at the…
Deep dive into plant signalling data reveals a noisy “elephant in the room”
A far-reaching study has cast doubt on statistical methods used to identify long distance signalling…