AS-CMC – a pan-cancer database of alternative splicing for molecular classification of cancer
Alternative splicing (AS) is a post-transcriptional regulation that leads to the complexity of the transcriptome.…
Browsing: Databases
Systematic characterization of cancer transcriptome at transcript resolution
Transcribed RNAs undergo various regulation and modification to become functional transcripts. Notably, cancer transcriptome has…
BIC – a database for the transcriptional landscape of bacteria in cancer
Microbial communities are massively resident in the human body, yet dysbiosis has been reported to…
LivestockExp – A web-based database server using 43,710 public RNA-seq samples for the analysis of gene expression and alternative splicing in livestock animals
Livestock animals is of great significance in agricultural production. However, the role of specific gene…
RiceNCexp – a rice non-coding RNA co-expression atlas based on massive RNA-seq and small-RNA seq data
Non-coding RNAs (ncRNAs) play important roles in regulating expression of protein-coding genes. Although gene expression…
HTCA – a database with an in-depth characterization of the single-cell human transcriptome
Single-cell RNA-sequencing (scRNA-seq) is one of the most used single-cell omics in recent decades. The…
PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics
Single-cell RNA-seq (scRNA-seq) is a powerful genomics technology to interrogate the cellular composition and behaviors…
Researchers produce a high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis
Accurate and comprehensive annotation of transcript sequences is essential for transcript quantification and differential gene…
Single-cell atlas of drug treatments in a mouse model of diabetic kidney disease
Diabetic kidney disease (DKD) occurs in ∼40% of patients with diabetes and causes kidney failure,…
Researchers used single-cell sequencing tool Perturb-seq on every human gene, linking each to its job in the cell
The Human Genome Project was an ambitious initiative to sequence every piece of human DNA.…