Systematic characterization of cancer transcriptome at transcript resolution
Transcribed RNAs undergo various regulation and modification to become functional transcripts. Notably, cancer transcriptome has…
Browsing: Databases
BIC – a database for the transcriptional landscape of bacteria in cancer
Microbial communities are massively resident in the human body, yet dysbiosis has been reported to…
LivestockExp – A web-based database server using 43,710 public RNA-seq samples for the analysis of gene expression and alternative splicing in livestock animals
Livestock animals is of great significance in agricultural production. However, the role of specific gene…
RiceNCexp – a rice non-coding RNA co-expression atlas based on massive RNA-seq and small-RNA seq data
Non-coding RNAs (ncRNAs) play important roles in regulating expression of protein-coding genes. Although gene expression…
HTCA – a database with an in-depth characterization of the single-cell human transcriptome
Single-cell RNA-sequencing (scRNA-seq) is one of the most used single-cell omics in recent decades. The…
PlaqView 2.0 – A comprehensive web portal for cardiovascular single-cell genomics
Single-cell RNA-seq (scRNA-seq) is a powerful genomics technology to interrogate the cellular composition and behaviors…
Researchers produce a high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis
Accurate and comprehensive annotation of transcript sequences is essential for transcript quantification and differential gene…
Single-cell atlas of drug treatments in a mouse model of diabetic kidney disease
Diabetic kidney disease (DKD) occurs in ∼40% of patients with diabetes and causes kidney failure,…
Researchers used single-cell sequencing tool Perturb-seq on every human gene, linking each to its job in the cell
The Human Genome Project was an ambitious initiative to sequence every piece of human DNA.…
New database to “SpUR” on cancer research
Splicing (represented by the scissors) in noncoding parts of mRNA enhances its export from the…